| Rank | Jugador | Equipo | Goles |
|---|---|---|---|
| 1 | Stuani | Girona | 31 |
| 2 | Luis Suárez | Real Zaragoza | 19 |
| 3 | Yuri | SD Ponferradina | 18 |
| 4 | Darwin Núñez | Almería | 16 |
| 5 | Stoichkov | Alcorcón | 16 |
| 6 | Rubén Castro | Las Palmas | 15 |
| 7 | Martín Merquelanz | CD Mirandés | 15 |
| 8 | Alfredo Ortuño | Real Oviedo | 14 |
| 9 | Armando Sadiku | Malaga | 13 |
| 10 | Curro Sánchez | Numancia | 13 |
| 11 | Hugo Fraile | Fuenlabrada | 13 |
| 12 | Álex Fernández | Cadiz | 12 |
| 13 | Okazaki | Huesca | 12 |
| 14 | Cristian Herrera | CD Lugo | 12 |
| 15 | Marcos André | CD Mirandés | 12 |
| 16 | Higinio Marín | Numancia | 10 |
| 17 | Choco Lozano | Cadiz | 10 |
| 18 | Juan Muñoz | Almería | 10 |
| 19 | José Carlos Lazo | Almería | 10 |
| 20 | J.Viera | Las Palmas | 10 |
| 21 | Álvaro Cejudo | Racing Santander | 9 |
| 22 | Fidel | Elche | 9 |
| 23 | Dani Gómez | Tenerife | 9 |
| 24 | Yacine Qasmi | Vallecano | 9 |
| 25 | Sekou Gassama | Fuenlabrada | 9 |
| 26 | Rafa Mir | Huesca | 9 |
| 27 | Dani Ojeda | Albacete Balompié SAD | 8 |
| 28 | Yoda | Racing Santander | 8 |
| 29 | Nino | Elche | 8 |
| 30 | Pere Milla | Elche | 8 |
| 31 | Luis Milla | Tenerife | 8 |
| 32 | Mario Suárez | Vallecano | 8 |
| 33 | E. Bárcenas | Real Oviedo | 8 |
| 34 | Aketxe | Deportivo | 7 |
| 35 | Víctor Mollejo | Deportivo | 7 |
| 36 | Alberto Escassi | Numancia | 7 |
| 37 | Aitor García | Sporting Gijón | 7 |
| 38 | Jonathas | Elche | 7 |
| 39 | Juan Villar | Vallecano | 7 |
| 40 | Adrián Embarba | Vallecano | 7 |
| 41 | Narváez | Las Palmas | 7 |
| 42 | Rico | Huesca | 7 |
| 43 | Manu Barreiro | CD Lugo | 7 |
| 44 | C.Santos | Deportivo | 6 |
| 45 | A.González | Malaga | 6 |
| 46 | Uros Djurdjevic | Sporting Gijón | 6 |
| 47 | Álex Bermejo | Tenerife | 6 |
| 48 | L.Ulloa | Vallecano | 6 |
| 49 | Óscar Arribas | Alcorcón | 6 |
| 50 | Matheus Barrozo | CD Mirandés | 6 |
| 51 | Nono | Extremadura UD | 6 |
| 52 | Alegría | Extremadura UD | 6 |
| 53 | Guillermo Fernández | Racing Santander | 5 |
| 54 | Kagawa | Real Zaragoza | 5 |
| 55 | Miguel Linares | Real Zaragoza | 5 |
| 56 | Javi Ros | Real Zaragoza | 5 |
| 57 | Raúl Guti | Real Zaragoza | 5 |
| 58 | A.Vázquez | Sporting Gijón | 5 |
| 59 | Alberto Perea | Cadiz | 5 |
| 60 | Suso Santana | Tenerife | 5 |
| 61 | Óscar Trejo | Vallecano | 5 |
| 62 | Tomas Pekhart | Las Palmas | 5 |
| 63 | Kaxe | SD Ponferradina | 5 |
| 64 | Pablo Valcarce | SD Ponferradina | 5 |
| 65 | Richard Boateng Welbeck | Alcorcón | 5 |
| 66 | B.García | Girona | 5 |
| 67 | Marco Sangalli | Real Oviedo | 5 |
| 68 | Cristo | Huesca | 5 |
| 69 | Moctar El Hacen | CD Lugo | 5 |
| 70 | Álvaro Rey | CD Mirandés | 5 |
| 71 | Óscar Pinchi | Extremadura UD | 5 |
| 72 | Giovanni Zarfino | Extremadura UD | 5 |
| 73 | Merino | Deportivo | 4 |
| 74 | M.Koné | Deportivo | 4 |
| 75 | Antoñín | Malaga | 4 |
| 76 | Roman Zozulya | Albacete Balompié SAD | 4 |
| 77 | Pedro Sánchez | Albacete Balompié SAD | 4 |
| 78 | Manu Fuster | Albacete Balompié SAD | 4 |
| 79 | Puado | Real Zaragoza | 4 |
| 80 | Filip Malbasic | Cadiz | 4 |
| 81 | B.Lasso | Tenerife | 4 |
| 82 | José Corpas | Almería | 4 |
| 83 | Álvaro García | Vallecano | 4 |
| 84 | Pedri | Las Palmas | 4 |
| 85 | I.López | SD Ponferradina | 4 |
| 86 | Ernesto Gómez | Alcorcón | 4 |
| 87 | Dani Romera | Alcorcón | 4 |
| 88 | Jeisson Martínez | Fuenlabrada | 4 |
| 89 | Iban Salvador | Fuenlabrada | 4 |
| 90 | Randy Nteka | Fuenlabrada | 4 |
| 91 | Glauder | Fuenlabrada | 4 |
| 92 | Marc Gual | Girona | 4 |
| 93 | Ibrahima Balde | Real Oviedo | 4 |
| 94 | Borja Sánchez | Real Oviedo | 4 |
| 95 | Juan Carlos Real | Huesca | 4 |
| 96 | Dani Raba | Huesca | 4 |
| 97 | José Ángel Carrillo | CD Lugo | 4 |
| 98 | Lombán | Malaga | 3 |
| 99 | Rey Manaj | Albacete Balompié SAD | 3 |
| 100 | Néstor Susaeta | Albacete Balompié SAD | 3 |
